feat: Add application-level settings for CSS color management

- Introduced a new table `application_setting` to store configurable application options.
- Implemented functions to manage CSS color settings, including loading, updating, and reading environment overrides.
- Added a new settings view to render and manage theme colors.
- Updated UI to include a settings page with theme color management and environment overrides display.
- Enhanced CSS styles for the settings page and sidebar navigation.
- Created unit and end-to-end tests for the new settings functionality and CSS management.

scripts/setup_database.py

@@ -1141,6 +1141,14 @@ def main() -> None:
         app_validated = True
         return True
 
+    should_run_migrations = args.run_migrations
+    auto_run_migrations_reason: Optional[str] = None
+    if args.seed_data and not should_run_migrations:
+        should_run_migrations = True
+        auto_run_migrations_reason = (
+            "Seed data requested without explicit --run-migrations; applying migrations first."
+        )
+
     try:
         if args.ensure_database:
             setup.ensure_database()
@@ -1154,8 +1162,10 @@ def main() -> None:
                 "SQLAlchemy schema initialization"
             ):
                 setup.initialize_schema()
-        if args.run_migrations:
+        if should_run_migrations:
             if ensure_application_connection_for("migration execution"):
+                if auto_run_migrations_reason:
+                    logger.info(auto_run_migrations_reason)
                 migrations_path = (
                     Path(args.migrations_dir)
                     if args.migrations_dir